STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_5040Putative serine/threonine-protein kinase pknH. (393 aa)    
Predicted Functional Partners:
UO65_0285
Serine/threonine phosphatase PPP.
  
  0.849
UO65_2538
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
  0.849
UO65_6231
Serine/threonine phosphatase PPP.
 
  0.849
UO65_0991
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
  
  0.847
UO65_6645
Serine/threonine protein kinase.
  
   
 0.760
UO65_4801
Hypothetical protein; FIG00672531.
 
 
 
 0.759
UO65_6605
Serine/threonine protein kinase.
  
  0.669
UO65_4509
Serine phosphatase RsbU, regulator of sigma subunit.
    
 0.620
UO65_5488
Serine phosphatase RsbU, regulator of sigma subunit.
    
 0.620
UO65_6460
Serine phosphatase RsbU, regulator of sigma subunit.
    
 0.620
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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