STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_5159Hypothetical protein. (60 aa)    
Predicted Functional Partners:
UO65_5158
Putative DNA-binding protein.
 
   
 0.934
UO65_2820
Putative DNA-binding protein in cluster with Type I restriction-modification system.
 
     0.770
UO65_3009
Putative DNA-binding protein.
  
     0.743
UO65_5749
Putative DNA-binding protein.
 
     0.733
UO65_6105
Putative DNA-binding protein.
  
     0.732
UO65_2980
Putative DNA-binding protein.
  
     0.729
UO65_6083
Putative DNA-binding protein.
 
   
 0.728
UO65_4369
Putative DNA-binding protein.
 
     0.726
UO65_4398
Putative DNA-binding protein.
  
     0.721
UO65_1108
Putative DNA-binding protein in cluster with Type I restriction-modification system.
  
     0.720
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.