STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_5246Putative OXIDOREDUCTASE. (504 aa)    
Predicted Functional Partners:
UO65_0800
Polyketide synthase.
   
 0.789
UO65_1871
Non-ribosomal peptide synthetase.
   
 0.789
UO65_0985
Hydride transferase 1.
  
     0.669
UO65_2712
Hypothetical protein.
  
  
 0.652
UO65_2294
AclJ.
  
  
 0.646
UO65_0374
Putative monooxygenase.
  
     0.617
UO65_2281
Lactyl (2) diphospho-(5')guanosine:7,8-didemethyl-8-hydroxy-5- deazariboflavin 2-phospho-L-lactate transferase.
 
   
 0.613
UO65_0971
Siderophore biosynthesis non-ribosomal peptide synthetase module; Bacillibactin synthetase component F.
   
 0.605
UO65_2325
FMN reductase.
  
  0.560
UO65_2280
Coenzyme F420-1:L-glutamate ligase; domain of unknown function.
 
  
 0.555
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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