STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_5493Hypothetical protein. (459 aa)    
Predicted Functional Partners:
UO65_5492
Sugar transferase; Involved in lipopolysaccharide synthesis.
  
  
 0.883
UO65_2486
Hypothetical protein.
   
  0.580
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.580
UO65_4973
Malto-oligosyltrehalose trehalohydrolase.
   
  0.580
UO65_1622
ATP-dependent DNA helicase UvrD/PcrA, actinomycete.
    
   0.548
UO65_2952
UDP-galactopyranose mutase.
  
 
  0.548
UO65_2533
Trehalose-6-phosphate phosphatase.
  
  0.541
UO65_5586
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.507
UO65_0992
Alpha,alpha-trehalose-phosphate synthase.
    
 0.488
UO65_0602
Hypothetical protein.
    
   0.476
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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