STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_5950Calcium binding protein. (183 aa)    
Predicted Functional Partners:
UO65_4843
Hypothetical protein.
   
 0.829
UO65_2056
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.803
UO65_3151
Calerythrin (Calcium-binding protein).
  
     0.763
UO65_4177
Peptidylprolyl isomerase, FKBP-type.
   
 0.720
UO65_5421
Peptidylprolyl isomerase, FKBP-type.
   
 0.720
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.719
UO65_0048
Hypothetical protein.
  
 
   0.678
UO65_0539
Transcriptional regulator, SARP family.
  
 
  0.655
UO65_4853
Transcriptional regulator, SARP family.
  
 
  0.650
UO65_1001
Hypothetical protein.
  
 
 0.628
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.