STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_6202Transcriptional regulator, XRE family. (148 aa)    
Predicted Functional Partners:
UO65_6203
Iron-regulated heparin binding hemagglutinin HbhA (Adhesin).
       0.848
UO65_0583
Hypothetical protein; FIG01121307.
  
     0.762
UO65_1616
Ubiquinone biosynthesis monooxygenase UbiB.
  
     0.743
UO65_5186
Arsenical pump-driving ATPase.
  
     0.739
UO65_1092
Phospholipid/glycerol acyltransferase.
  
     0.716
UO65_6221
Hypothetical protein.
  
     0.711
UO65_5185
Arsenical pump-driving ATPase.
  
     0.662
UO65_1091
UDP-glucose 4-epimerase.
  
     0.626
UO65_6204
Hypothetical protein; FIG01039679.
       0.625
UO65_6206
Hypothetical protein; FIG01037150.
       0.554
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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