STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCZ04_05610Unannotated protein. (384 aa)    
Predicted Functional Partners:
leuC
Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 0.948
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
 
 
 0.933
GCA_000512235_00367
Unannotated protein.
  
 
 0.926
DCZ04_05300
Unannotated protein.
     
 0.915
DCZ04_17475
Unannotated protein.
 
0.914
GCA_000512235_00710
Unannotated protein.
 
0.912
DCZ04_14310
Unannotated protein.
  
 
 0.895
GCA_000512235_01229
Unannotated protein.
   
 
 0.888
DCZ04_14270
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.887
DCZ04_02515
Unannotated protein.
   
 0.887
Your Current Organism:
Syntrophorhabdus aromaticivorans
NCBI taxonomy Id: 909663
Other names: S. aromaticivorans UI, Syntrophorhabdus aromaticivorans UI, Syntrophorhabdus aromaticivorans str. UI, Syntrophorhabdus aromaticivorans strain UI, delta proteobacterium UI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.