STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCZ04_13330Unannotated protein. (157 aa)    
Predicted Functional Partners:
DCZ04_02970
Unannotated protein.
 0.991
DCZ04_02965
Unannotated protein.
 0.991
DCZ04_11060
Unannotated protein.
 0.991
DCZ04_13335
Unannotated protein.
 
 0.989
DCZ04_13340
Unannotated protein.
 
 
 
 0.960
DCZ04_02860
Unannotated protein.
 0.882
DCZ04_12075
Unannotated protein.
 
 0.877
DCZ04_06650
Unannotated protein.
 
 0.856
DCZ04_12070
Unannotated protein.
 
 0.833
DCZ04_07435
Unannotated protein.
       0.732
Your Current Organism:
Syntrophorhabdus aromaticivorans
NCBI taxonomy Id: 909663
Other names: S. aromaticivorans UI, Syntrophorhabdus aromaticivorans UI, Syntrophorhabdus aromaticivorans str. UI, Syntrophorhabdus aromaticivorans strain UI, delta proteobacterium UI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.