STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCZ04_11230Unannotated protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (407 aa)    
Predicted Functional Partners:
GCA_000512235_00902
Unannotated protein.
     
 0.999
GCA_000512235_02520
Unannotated protein.
     
 0.999
GCA_000512235_02521
Unannotated protein.
     
 0.999
DCZ04_15860
Unannotated protein.
     
 0.965
nuoB
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.962
GCA_000512235_03061
Unannotated protein.
     
 0.961
DCZ04_17430
Unannotated protein.
  
 
 0.957
GCA_000512235_01421
Unannotated protein.
   
   0.918
DCZ04_11220
Unannotated protein.
 
 
 0.909
DCZ04_11225
Unannotated protein.
 
 
 0.906
Your Current Organism:
Syntrophorhabdus aromaticivorans
NCBI taxonomy Id: 909663
Other names: S. aromaticivorans UI, Syntrophorhabdus aromaticivorans UI, Syntrophorhabdus aromaticivorans str. UI, Syntrophorhabdus aromaticivorans strain UI, delta proteobacterium UI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.