STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCZ04_17325Unannotated protein. (344 aa)    
Predicted Functional Partners:
DCZ04_17340
Unannotated protein.
 
 0.954
DCZ04_17320
Unannotated protein.
 
     0.950
DCZ04_17295
Unannotated protein.
 
     0.943
DCZ04_17305
Unannotated protein.
 
     0.909
DCZ04_17355
Unannotated protein; Belongs to the anti-sigma-factor antagonist family.
 
 0.897
DCZ04_17345
Unannotated protein.
 
 0.897
DCZ04_17315
Unannotated protein.
 
     0.884
DCZ04_06130
Unannotated protein.
  
 0.861
DCZ04_05145
Unannotated protein.
  
 0.860
DCZ04_17285
Unannotated protein.
       0.791
Your Current Organism:
Syntrophorhabdus aromaticivorans
NCBI taxonomy Id: 909663
Other names: S. aromaticivorans UI, Syntrophorhabdus aromaticivorans UI, Syntrophorhabdus aromaticivorans str. UI, Syntrophorhabdus aromaticivorans strain UI, delta proteobacterium UI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.