STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000512235_03303Unannotated protein. (565 aa)    
Predicted Functional Partners:
flgF
Unannotated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.927
flgG
Unannotated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.927
GCA_000512235_03396
Unannotated protein.
  
 
 0.916
GCA_000512235_03302
Unannotated protein.
       0.773
DCZ04_13365
Unannotated protein.
    
 0.768
DCZ04_08970
Unannotated protein; Belongs to the CinA family.
  
 
  0.745
DCZ04_13360
Unannotated protein.
    
  0.732
adk
Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  0.668
DCZ04_04950
Unannotated protein.
   
   0.631
fliE
Unannotated protein.
 
  
 0.630
Your Current Organism:
Syntrophorhabdus aromaticivorans
NCBI taxonomy Id: 909663
Other names: S. aromaticivorans UI, Syntrophorhabdus aromaticivorans UI, Syntrophorhabdus aromaticivorans str. UI, Syntrophorhabdus aromaticivorans strain UI, delta proteobacterium UI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.