STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403035_00880Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_000403035_00877
Unannotated protein.
 
 0.995
GCA_000403035_00878
Unannotated protein.
  
  0.905
GCA_000403035_00879
Unannotated protein.
  
  0.905
GCA_000403035_01580
Unannotated protein.
   
 0.637
GCA_000403035_01256
Unannotated protein.
 
     0.628
GCA_000403035_00353
Unannotated protein.
    
 0.552
GCA_000403035_00582
Unannotated protein.
    
  0.532
GCA_000403035_00996
Unannotated protein.
    
  0.506
GCA_000403035_00459
Unannotated protein.
  
     0.435
GCA_000403035_00523
Unannotated protein.
 
     0.401
Your Current Organism:
Latescibacter anaerobius
NCBI taxonomy Id: 910047
Other names: C. Latescibacter anaerobius SCGC AAA252-E07, Candidatus Latescibacter anaerobius SCGC AAA252-E07, Latescibacteria bacterium SCGC AAA252-E07, candidate division WS3 bacterium SCGC AAA252-E07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.