STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC58328.1Hypothetical protein. (496 aa)    
Predicted Functional Partners:
SFC97257.1
Hypothetical protein.
  
     0.760
vapC-2
Predicted nucleic acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.506
SFD46412.1
ATP-binding cassette, subfamily B.
  
     0.495
SFD69386.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.486
vapC
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.482
SFC58355.1
Hypothetical protein.
       0.471
SFC58380.1
Hypothetical protein.
       0.471
SFC58405.1
VWA domain containing CoxE-like protein.
       0.471
SFD66687.1
Right handed beta helix region.
  
     0.466
SFC58425.1
MoxR-like ATPase.
       0.425
Your Current Organism:
Streptomyces aidingensis
NCBI taxonomy Id: 910347
Other names: CGMCC 4.5739, NBRC 108211, S. aidingensis, Streptomyces aidingensis Xia et al. 2013, Streptomyces sp. TRM 46012, strain TRM 46012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.