STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD45742.1Protein of unknown function. (71 aa)    
Predicted Functional Partners:
SFD45712.1
Helix-turn-helix domain-containing protein.
 
     0.943
SFD28384.1
Helix-turn-helix domain-containing protein.
 
     0.755
SFC91029.1
Protein of unknown function.
  
     0.734
SFD28344.1
Protein of unknown function.
  
     0.734
SFD61444.1
Protein of unknown function.
  
     0.734
SFC58614.1
Protein of unknown function.
  
     0.715
SFC38552.1
Helix-turn-helix domain-containing protein.
  
     0.713
SFC91045.1
Helix-turn-helix domain-containing protein.
  
     0.708
SFB86061.1
O-Methyltransferase involved in polyketide biosynthesis.
  
     0.693
SFD79865.1
S-adenosyl methyltransferase.
  
     0.685
Your Current Organism:
Streptomyces aidingensis
NCBI taxonomy Id: 910347
Other names: CGMCC 4.5739, NBRC 108211, S. aidingensis, Streptomyces aidingensis Xia et al. 2013, Streptomyces sp. TRM 46012, strain TRM 46012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.