STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_0181DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. (137 aa)    
Predicted Functional Partners:
GEAM_0102
DNA polymerase III chi subunit; Protein involved in DNA-directed DNA polymerase activity, DNA binding and DNA replication.
   
 0.991
dnaX
DNA polymerase III gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 0.990
holB
DNA polymerase III delta prime subunit; Protein involved in DNA-directed DNA polymerase activity, DNA binding, 3'-5' exonuclease activity and DNA replication.
  
 
 0.989
holA
DNA polymerase III delta subunit; Protein involved in DNA binding, DNA-directed DNA polymerase activity and DNA replication.
  
 
 0.987
dnaE
DNA polymerase III alpha subunit; Protein involved in catalytic activity, nucleic acid binding, 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding and DNA replication.
    
 0.984
GEAM_2135
DNA polymerase III theta subunit; Protein involved in DNA-directed DNA polymerase activity, DNA binding and DNA replication.
  
 
  0.959
GEAM_4265
DNA polymerase III theta subunit; Protein involved in DNA-directed DNA polymerase activity, DNA binding and DNA replication.
  
 
  0.944
dnaQ
DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
    
 0.942
dnaN
DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.929
rimI
Ribosomal protein S18p-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.791
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana ATCC 33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.