STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_1247TetR family transcriptional regulator; Protein involved in DNA binding. (194 aa)    
Predicted Functional Partners:
GEAM_1246
Membrane fusion component of a tripartite multidrug resistance system; Protein involved in transmembrane transport.
       0.586
GEAM_1245
Inner membrane component of a tripartite multidrug resistance system; Protein involved in drug transmembrane transport, response to drug, transmembrane transport and transport; Belongs to the major facilitator superfamily.
       0.429
GEAM_3268
Flavohemoprotein; Protein involved in FMN binding, pyridoxamine-phosphate oxidase activity and oxidation-reduction process.
 
  
 0.419
GEAM_4315
AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.411
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana ATCC 33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.