STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430485_02072Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_000430485_00118
Unannotated protein.
 
  
 0.939
GCA_000430485_00780
Unannotated protein.
 
 
 0.915
GCA_000430485_01523
Unannotated protein.
   
 
 0.853
GCA_000430485_02070
Unannotated protein.
       0.851
GCA_000430485_02071
Unannotated protein.
       0.851
GCA_000430485_02068
Unannotated protein.
 
    0.814
GCA_000430485_00869
Unannotated protein.
  
  
 0.811
GCA_000430485_00447
Unannotated protein.
   
    0.783
GCA_000430485_00520
Unannotated protein.
 
  
 0.775
GCA_000430485_00119
Unannotated protein.
   
  
 0.758
Your Current Organism:
Thermococcus sp. PK
NCBI taxonomy Id: 913025
Other names: T. sp. PK
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