STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_00545Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000380925_00544
Unannotated protein.
       0.551
GCA_000380925_01530
Unannotated protein.
 
     0.496
GCA_000380925_01461
Unannotated protein.
  
     0.483
GCA_000380925_00719
Unannotated protein.
  
     0.477
GCA_000380925_00542
Unannotated protein.
 
     0.466
GCA_000380925_00546
Unannotated protein.
 
    
0.456
GCA_000380925_01462
Unannotated protein.
  
     0.454
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.