STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_00647Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000380925_00940
Unannotated protein.
    
 
 0.816
GCA_000380925_01378
Unannotated protein.
    
   0.738
GCA_000380925_01032
Unannotated protein.
  
 
  0.695
GCA_000380925_00215
Unannotated protein.
    
 
 0.636
GCA_000380925_01445
Unannotated protein.
    
 
 0.636
GCA_000380925_00754
Unannotated protein.
   
 
  0.635
GCA_000380925_00506
Unannotated protein.
   
   0.613
GCA_000380925_01870
Unannotated protein.
  
 
 0.612
GCA_000380925_00455
Unannotated protein.
    
 0.605
GCA_000380925_01771
Unannotated protein.
  
 
  0.580
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.