STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_00801Unannotated protein. (544 aa)    
Predicted Functional Partners:
GCA_000380925_00804
Unannotated protein.
 
 0.977
GCA_000380925_00803
Unannotated protein.
 
 0.972
GCA_000380925_00802
Unannotated protein.
 
 
 0.968
GCA_000380925_00364
Unannotated protein.
 
 0.948
GCA_000380925_01499
Unannotated protein.
 
 0.947
GCA_000380925_01498
Unannotated protein.
 
 0.942
GCA_000380925_00365
Unannotated protein.
 
 0.939
GCA_000380925_00864
Unannotated protein.
 
 0.939
GCA_000380925_01501
Unannotated protein.
 
 0.935
GCA_000380925_00863
Unannotated protein.
 
 
 0.934
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.