STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_01163Unannotated protein. (1068 aa)    
Predicted Functional Partners:
GCA_000380925_01986
Unannotated protein.
 
 0.999
GCA_000380925_01676
Unannotated protein.
 
 
 0.998
GCA_000380925_01164
Unannotated protein.
 
 
 0.947
GCA_000380925_01161
Unannotated protein.
    
 0.720
GCA_000380925_01580
Unannotated protein.
    
 0.720
GCA_000380925_01942
Unannotated protein.
    
 0.717
GCA_000380925_01962
Unannotated protein.
    
 0.660
GCA_000380925_02091
Unannotated protein.
 
 
 0.625
GCA_000380925_01939
Unannotated protein.
 
  
 0.623
GCA_000380925_02090
Unannotated protein.
    
 0.615
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.