STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_01187Unannotated protein. (65 aa)    
Predicted Functional Partners:
GCA_000380925_00308
Unannotated protein.
  
 0.997
GCA_000380925_01898
Unannotated protein.
  
 
 0.963
GCA_000380925_01186
Unannotated protein.
 
     0.949
GCA_000380925_01554
Unannotated protein.
  
 0.862
GCA_000380925_01115
Unannotated protein.
    
 0.709
GCA_000380925_00670
Unannotated protein.
    
  0.677
GCA_000380925_01184
Unannotated protein.
 
     0.480
GCA_000380925_01185
Unannotated protein.
       0.457
GCA_000380925_01188
Unannotated protein.
       0.433
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.