STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_01207Unannotated protein. (87 aa)    
Predicted Functional Partners:
GCA_000380925_02006
Unannotated protein.
  
 0.966
GCA_000380925_00011
Unannotated protein.
   
 0.959
GCA_000380925_00980
Unannotated protein.
   
 0.959
GCA_000380925_01790
Unannotated protein.
    
 0.950
GCA_000380925_00164
Unannotated protein.
   
  0.949
GCA_000380925_00489
Unannotated protein.
    
 0.919
GCA_000380925_00940
Unannotated protein.
    
 0.903
GCA_000380925_00742
Unannotated protein.
    
  0.901
GCA_000380925_01934
Unannotated protein.
    
  0.901
GCA_000380925_02098
Unannotated protein.
    
  0.901
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.