STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380925_01340Unannotated protein. (170 aa)    
Predicted Functional Partners:
GCA_000380925_00010
Unannotated protein.
 
     0.976
GCA_000380925_01341
Unannotated protein.
 
 0.867
GCA_000380925_01213
Unannotated protein.
 
  
 0.715
GCA_000380925_01218
Unannotated protein.
 
  
 0.696
GCA_000380925_00617
Unannotated protein.
    
  0.670
GCA_000380925_00430
Unannotated protein.
     
 0.648
GCA_000380925_01465
Unannotated protein.
     
 0.648
GCA_000380925_00396
Unannotated protein.
    
 0.615
GCA_000380925_00614
Unannotated protein.
    
 0.615
GCA_000380925_00044
Unannotated protein.
    
 0.554
Your Current Organism:
Atribacteria bacterium SCGC AAA252M02
NCBI taxonomy Id: 913317
Other names: A. bacterium SCGC AAA252-M02, Atribacteria bacterium SCGC AAA252-M02, candidate division OP9 bacterium SCGC AAA252-M02, candidate division OP9_JS1 bacterium SCGC AAA252-M02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.