STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402075_00717Unannotated protein. (62 aa)    
Predicted Functional Partners:
GCA_000402075_00716
Unannotated protein.
       0.667
GCA_000402075_00715
Unannotated protein.
       0.548
GCA_000402075_00718
Unannotated protein.
       0.547
GCA_000402075_00714
Unannotated protein.
       0.540
GCA_000402075_00712
Unannotated protein.
       0.537
GCA_000402075_00713
Unannotated protein.
       0.537
GCA_000402075_00720
Unannotated protein.
       0.479
GCA_000402075_00719
Unannotated protein.
       0.472
GCA_000402075_00721
Unannotated protein.
       0.435
GCA_000402075_00722
Unannotated protein.
       0.435
Your Current Organism:
Thaumarchaeota archaeon SCGC AAA007O23
NCBI taxonomy Id: 913333
Other names: Marine Group I crenarchaeote SCGC AAA007-O23, Marine Group I thaumarchaeote SCGC AAA007-O23, T. archaeon SCGC AAA007-O23, Thaumarchaeota archaeon SCGC AAA007-O23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.