STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPAS2Neuronal PAS domain protein 2. (796 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
0.930
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
0.901
CRY2
Cryptochrome-2 isoform X1.
   
 0.898
CRY1
Cryptochrome-1.
   
 0.893
CIPC
CLOCK-interacting pacemaker isoform X1.
    
 0.838
LOC103813259
Casein kinase 1, epsilon.
    
 0.813
PER2
Period circadian protein homolog 2.
    
0.796
SIRT1
NAD-dependent protein deacetylase sirtuin-1 isoform X2.
    
 0.784
LOC103813054
Cryptochrome DASH-like isoform X2.
   
 0.770
LOC103822376
Cryptochrome-1-like.
   
 0.763
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.