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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain-containing protein 2 isoform X1. (540 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.564
LOC103824481
ATP-binding cassette, subfamily F, member 2.
  
  
 0.541
ABCF3
ATP-binding cassette sub-family F member 3 isoform X1.
  
  
 0.541
PUS10
Putative tRNA pseudouridine synthase Pus10 isoform X3.
      
 0.540
CRYL1
L-gulonate 3-dehydrogenase.
      
 0.533
CDA
Cytidine deaminase.
     
 0.516
TRMT2A
TRNA (uracil-5-)-methyltransferase homolog A.
  
  
 0.506
TRMT2B
TRNA (uracil(54)-C(5))-methyltransferase homolog.
  
  
 0.506
FARS2
LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, mitochondrial.
  
  
 0.496
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
  
 0.494
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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