STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103812489Alpha-2-macroglobulin-like protein 1 isoform X1. (1467 aa)    
Predicted Functional Partners:
CBX2
Chromobox 2.
    
 0.629
CBX8
Chromobox protein homolog 8.
    
 0.618
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.613
CBX4
LOW QUALITY PROTEIN: E3 SUMO-protein ligase CBX4.
    
 0.610
PCGF2
Polycomb group ring finger 2.
    
 0.539
BMI1
Polycomb group RING finger protein 4.
    
 0.539
SCML2
Scm polycomb group protein like 2.
    
 0.530
SCMH1
Polycomb protein SCMH1 isoform X1.
    
 0.530
C7
Complement component C7.
   
 0.458
CFI
Complement factor I isoform X1.
   
 0.448
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.