STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000000047annotation not available (113 aa)    
Predicted Functional Partners:
RPL21
Large subunit ribosomal protein L21e.
   
 0.997
RPL8
Ribosomal protein L8.
  
 0.997
RPL30
Large subunit ribosomal protein L30e.
   
 0.996
RPL5
Ribosomal protein L5.
  
 0.996
RPL31
Large subunit ribosomal protein L31e.
   
 0.995
RPL36
Large subunit ribosomal protein L36e.
   
 0.995
RPLP0
Large subunit ribosomal protein LP0.
  
 0.995
RPL6
60S ribosomal protein L6 isoform X2.
  
 0.995
RPL23A
Large subunit ribosomal protein L23Ae.
  
 0.995
RPL13
Large subunit ribosomal protein L13e.
   
 0.995
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.