STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP39Rho GTPase activating protein 39. (1010 aa)    
Predicted Functional Partners:
ASPHD2
Aspartate beta-hydroxylase domain-containing protein 2.
      
 0.537
TMEM35A
Transmembrane protein 35A.
     
 0.528
IPO5
Importin-5.
    
 
 0.484
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
      
 0.455
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.442
RPL3
Large subunit ribosomal protein L3e.
    
 0.441
RPL3L
Ribosomal protein L3 like.
    
 0.441
ELMOD3
ELMO domain-containing protein 3.
      
 0.441
ENSSCAP00000003299
annotation not available
   
 
 0.418
CNKSR2
Connector enhancer of kinase suppressor of ras 2 isoform X1.
   
 
 0.418
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.