STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC1Polyhomeotic-like protein 1 isoform X1. (1008 aa)    
Predicted Functional Partners:
CBX2
Chromobox 2.
    
 0.979
CBX8
Chromobox protein homolog 8.
    
 0.973
CBX4
LOW QUALITY PROTEIN: E3 SUMO-protein ligase CBX4.
    
 0.971
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.953
CBX6
Chromobox protein homolog 6.
    
 0.946
CBX7
LOW QUALITY PROTEIN: chromobox protein homolog 7.
    
 0.945
PCGF2
Polycomb group ring finger 2.
    
 0.908
BMI1
Polycomb group RING finger protein 4.
    
 0.908
PCGF1
Polycomb group RING finger protein 1 isoform X3.
    
 0.834
SCML2
Scm polycomb group protein like 2.
    
0.803
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.