STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK19LOW QUALITY PROTEIN: cyclin-dependent kinase 19. (433 aa)    
Predicted Functional Partners:
CCNC
Cyclin-C isoform X1.
   
 0.963
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
 0.932
MED7
Mediator of RNA polymerase II transcription subunit 7.
    
 0.929
MED12
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12.
    
 0.929
MED1
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1.
    
 0.926
MED6
Mediator of RNA polymerase II transcription subunit 6.
    
 0.922
MED17
Mediator of RNA polymerase II transcription subunit 17.
    
 0.918
MED30
Mediator of RNA polymerase II transcription subunit 30 isoform X1.
    
 0.917
MED13
Mediator of RNA polymerase II transcription subunit 13.
    
 0.916
MED26
Mediator of RNA polymerase II transcription subunit 26.
    
 0.915
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.