STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOMESLOW QUALITY PROTEIN: eomesodermin homolog. (716 aa)    
Predicted Functional Partners:
ENSSCAP00000020530
annotation not available
   
  
 0.606
KLRG1
Killer cell lectin-like receptor subfamily G member 1.
   
  
 0.573
PAX6
Paired box protein Pax-6 isoform X1.
   
 0.567
TBX19
T-box transcription factor 19.
   
 
0.565
TBXT
T-box transcription factor T.
   
 
0.565
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
   
 
 0.542
PANX2
Pannexin-2 isoform X1.
      
 0.536
NES
Nestin.
     
 0.533
RPS6
LOW QUALITY PROTEIN: 40S ribosomal protein S6.
      
 0.508
FOXG1
Forkhead box G1.
   
 
 0.494
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.