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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M6PRCation-dependent mannose-6-phosphate receptor. (280 aa)    
Predicted Functional Partners:
IGF2R
Cation-independent mannose-6-phosphate receptor.
     
 0.981
GGA3
ADP-ribosylation factor-binding protein GGA3 isoform X1.
  
 
 
 0.920
ENSSCAP00000021850
annotation not available
   
 
 0.694
VAMP3
Vesicle-associated membrane protein 3 isoform X2.
   
 
 0.616
CTSZ
Cathepsin X.
   
 
 0.616
VAMP7
Vesicle-associated membrane protein 7 isoform X1.
     
 0.603
GCC2
GRIP and coiled-coil domain-containing protein 2.
    
 0.598
AP1G1
AP-1 complex subunit gamma-1 isoform X1.
     
 0.574
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1.
   
 
 0.543
AP2A2
AP-2 complex subunit alpha-2 isoform X1.
   
 
  0.534
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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