STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSTA3GDP-L-fucose synthase. (374 aa)    
Predicted Functional Partners:
GMDS
GDP-mannose 4,6 dehydratase.
 0.999
FPGT
Fucose-1-phosphate guanylyltransferase.
    
 0.953
ENSSCAP00000002922
annotation not available
   
 0.788
GALE
UDP-galactose-4-epimerase.
  
 0.679
UBE2L3
Ubiquitin-conjugating enzyme E2 L3.
 
    
 0.614
FUT8
Glycoprotein 6-alpha-L-fucosyltransferase.
      
 0.613
UGDH
UDP-glucose 6-dehydrogenase.
  
 0.602
GMPPA
Mannose-1-phosphate guanyltransferase alpha.
  
 
 0.579
FCSK
L-fucose kinase.
  
  
 0.569
GALT
UDPglucose--hexose-1-phosphate uridylyltransferase.
   
 
 0.566
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.