STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108962334Uncharacterized protein LOC108962334. (388 aa)    
Predicted Functional Partners:
FAAP24
Fanconi anemia core complex-associated protein 24.
      
 0.612
NUSAP1
Nucleolar and spindle-associated protein 1 isoform X1.
      
 0.611
PNPLA4
Patatin-like phospholipase domain-containing protein 4 isoform X1.
    
 
 0.500
PNPLA1
Patatin-like phospholipase domain-containing protein 1.
    
 
 0.500
PNPLA2
Patatin-like phospholipase domain-containing protein 2.
    
 
 0.500
PNPLA3
Patatin-like phospholipase domain-containing protein 2.
    
 
 0.481
AASDH
Beta-alanine-activating enzyme.
    
 0.476
REEP3
Receptor expression-enhancing protein 1/2/3/4.
   
  
 0.416
ENSSCAP00000014139
annotation not available
  
     0.415
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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