STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC1COX assembly mitochondrial protein homolog. (153 aa)    
Predicted Functional Partners:
SMIM20
Small integral membrane protein 20.
   
 
 0.923
SURF1
Surfeit locus protein 1 isoform X1.
   
 
 0.917
AZI2
5-azacytidine-induced protein 2 isoform X1.
      
 0.889
LOC103823857
Cytochrome c oxidase assembly protein COX14 homolog.
    
 0.875
LOC103827112
Cytochrome c oxidase assembly protein subunit 17.
   
 
 0.780
ENSSCAP00000023395
Cytochrome c oxidase assembly factor 5.
   
 
 0.714
COA1
Cytochrome c oxidase assembly factor 1 homolog isoform X3.
    
 0.709
COX4I1
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
    
 0.622
ATP23
Mitochondrial inner membrane protease ATP23 homolog isoform X1.
   
  
 0.613
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
      
 0.613
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.