Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001003annotation not available (61 aa)    
Predicted Functional Partners:
VCL
Vinculin isoform X2.
   
 
 0.834
MYOZ2
Myozenin-2.
   
 
 0.798
MYOZ1
Myozenin-1 isoform X2.
   
 
 0.794
TNNI2
Troponin I, fast skeletal muscle isoform X1.
   
 0.786
TNNI1
Troponin I, slow skeletal muscle.
   
 0.752
TNNC2
Troponin C, skeletal muscle.
   
 0.750
MYOM2
Myomesin-2.
   
 0.710
ACTN1
Alpha-actinin-1 isoform X1.
   
 0.685
ENSSCAP00000014224
annotation not available
   
 0.681
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.681
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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