STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103818207Transmembrane protein 17B-like. (244 aa)    
Predicted Functional Partners:
TMEM231
Transmembrane protein 231 isoform X1.
    
 0.762
B9D1
B9 domain-containing protein 1 isoform X2.
    
 0.749
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.745
TMEM67
Meckelin.
     
 0.741
MKS1
Meckel syndrome type 1 protein.
     
 0.684
CEP290
Centrosomal protein 290.
     
 0.555
TMEM216
Transmembrane protein 216.
   
 
 0.535
TMEM80
Transmembrane protein 216.
   
 
 0.535
TMEM237
Transmembrane protein 237.
   
  
 0.487
AHI1
Jouberin.
     
 0.486
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.