Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEDD9Enhancer of filamentation 1. (814 aa)    
Predicted Functional Partners:
CRKL
Proto-oncogene C-crk.
    
 0.932
CRK
CRK proto-oncogene, adaptor protein.
    
 0.925
LUM
Lumican.
    
 0.895
GRIN3A
LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3A.
      
 0.888
BCAR1
Breast cancer anti-estrogen resistance protein 1.
    
   0.836
CRADD
CASP2 and RIPK1 domain containing adaptor with death domain.
      
 0.831
ENSSCAP00000002619
Protein-tyrosine kinase 2-beta-like.
   
 0.822
PTK2
Focal adhesion kinase 1 isoform X15.
   
 0.822
VCL
Vinculin isoform X2.
    
 0.796
BCAR3
Breast cancer anti-estrogen resistance protein 3 isoform X1.
    
 0.783
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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