STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM13Small integral membrane protein 13. (89 aa)    
Predicted Functional Partners:
NAA15
N-alpha-acetyltransferase 15/16, NatA auxiliary subunit.
   
 
 0.808
NAA16
N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1.
   
 
 0.808
RPL35
Large subunit ribosomal protein L35e.
   
 
 0.745
NAA50
N-alpha-acetyltransferase 50 isoform X1.
   
 
 0.716
KAT14
Cysteine-rich protein 2-binding protein isoform X1.
   
 
 0.716
NAA60
N-alpha-acetyltransferase 60.
   
 
 0.716
RPL23A
Large subunit ribosomal protein L23Ae.
   
 
 0.701
RPS3
Small subunit ribosomal protein S3e.
   
   0.699
RPL26L1
Large subunit ribosomal protein L26e.
   
 
 0.692
RPL19
Large subunit ribosomal protein L19e.
   
   0.683
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.