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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001039Spectrin beta chain, non-erythrocytic 4-like. (594 aa)    
Predicted Functional Partners:
ENSSCAP00000010101
Spectrin beta chain, non-erythrocytic 1-like.
 
  
  0.924
SPTAN1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
   
0.858
ITSN2
Intersectin-2 isoform X1.
     
 0.621
ANK3
Ankyrin-3 isoform X1.
   
 0.564
ANK2
Ankyrin-2 isoform X1.
   
 0.564
ANK1
Ankyrin 1.
   
 0.564
ITSN1
Intersectin-1 isoform X1.
     
 0.527
ENSSCAP00000008639
annotation not available
   
 0.486
ENSSCAP00000008643
annotation not available
   
 0.486
ANKDD1B
Ankyrin repeat and death domain-containing protein 1B isoform X1.
   
 0.476
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.