Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001050annotation not available (310 aa)    
Predicted Functional Partners:
TTC36
Tetratricopeptide repeat protein 36.
      
 0.683
ENSSCAP00000002155
Neurabin-2-like.
    
 
 0.608
PPP1R9A
Protein phosphatase 1 regulatory subunit 9A.
    
 
 0.608
LOC103814438
Neurabin-1-like isoform X1.
    
 
 0.608
CDC42BPB
Serine/threonine-protein kinase MRCK beta isoform X1.
    
 
 0.602
ARHGAP32
Rho GTPase activating protein 32.
   
 
 0.564
GTF3C1
LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 1.
      
 0.546
GCC2
GRIP and coiled-coil domain-containing protein 2.
      
 0.528
FAM171A1
Protein FAM171A1 isoform X1.
    
 
 0.495
BSN
LOW QUALITY PROTEIN: protein bassoon.
   
 
 0.482
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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