STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB41Ras-related protein Rab-41 isoform X3. (207 aa)    
Predicted Functional Partners:
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.887
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
   
 0.879
ARL1
ADP-ribosylation factor-like protein 1.
   
 0.860
RGP1
RAB6A-GEF complex partner protein 2.
    
 0.834
BICD1
Protein bicaudal D homolog 1 isoform X1.
    
 0.827
BICD2
Protein bicaudal D homolog 2 isoform X1.
    
 0.827
COG6
Conserved oligomeric Golgi complex subunit 6 isoform X1.
   
 0.815
ARFRP1
ADP-ribosylation factor related protein 1.
    
 0.814
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.811
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
    
 0.798
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.