Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C9orf85Uncharacterized protein C9orf85 homolog. (152 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
   0.826
CEMIP2
Cell surface hyaluronidase.
      
 0.693
BABAM2
BRISC and BRCA1-A complex member 2 isoform X1.
    
   0.692
TMC1
Transmembrane channel-like protein 1.
    
 
 0.616
ABRAXAS2
BRISC complex subunit Abraxas 2.
    
   0.603
ZFAND5
AN1-type zinc finger protein 5.
      
 0.528
RSRC2
Arginine/serine-rich coiled-coil protein 2 isoform X1.
      
 0.528
LOC103812267
AN1-type zinc finger protein 5-like isoform X2.
      
 0.528
TMC3
Transmembrane channel like 3.
    
 
 0.484
NOC4L
U3 small nucleolar RNA-associated protein 19.
      
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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