Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGALSLGalectin-related protein. (171 aa)    
Predicted Functional Partners:
TBC1D31
TBC1 domain family member 31 isoform X1.
      
 0.645
LYRM9
LYR motif-containing protein 9.
      
 0.585
MRS2
Magnesium transporter MRS2 homolog, mitochondrial.
      
 0.579
ITGB1BP1
Integrin beta-1-binding protein 1 isoform X1.
      
 0.579
LINGO2
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2.
      
 0.543
UBASH3B
Ubiquitin-associated and SH3 domain-containing protein B.
      
 0.530
ST3GAL6
Neolactotetraosylceramide alpha-2,3-sialyltransferase (sialyltransferase 10).
      
 0.528
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1 isoform X1.
      
 0.527
CASTOR2
Cytosolic arginine sensor for mTORC1 subunit 2 isoform X1.
      
 0.527
PCDH1
Protocadherin-1 isoform X1.
     
 0.505
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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