Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TOPAZ1Testis and ovary specific PAZ domain containing 1. (1527 aa)    
Predicted Functional Partners:
APBA1
Amyloid-beta A4 precursor protein-binding family A member 1 isoform X1.
      
 0.682
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.614
TUBGCP5
Gamma-tubulin complex component 5 isoform X2.
   
 0.613
CEP126
Centrosomal protein 126.
    
 
 0.608
CWC25
Pre-mRNA-splicing factor CWC25 homolog isoform X1.
   
  
 0.599
TUBGCP4
Gamma-tubulin complex component 4.
    
 0.580
NEDD1
Protein NEDD1.
    
 0.570
GREB1L
GREB1-like protein isoform X4.
      
 0.562
ENSSCAP00000014214
annotation not available
   
 0.556
NME8
Thioredoxin domain-containing protein 3.
   
 0.556
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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