STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LLOW QUALITY PROTEIN: tumor protein p63-regulated gene 1-like protein. (230 aa)    
Predicted Functional Partners:
ENSSCAP00000012048
annotation not available
   
 0.786
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.710
SLU7
Pre-mRNA-splicing factor SLU7 isoform X2.
    
 0.683
MAGOH
Protein mago nashi homolog.
   
 0.679
NUDT21
Nudix hydrolase 21.
   
 
 0.629
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.628
U2AF1
Splicing factor U2AF 35 kDa subunit isoform X2.
   
 0.600
ZRSR2
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.
   
 0.600
GPR162
Probable G-protein coupled receptor 162.
    
 0.598
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.596
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.