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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A19Solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19. (322 aa)    
Predicted Functional Partners:
ENSSCAP00000002922
annotation not available
   
   0.802
RPL14
Large subunit ribosomal protein L14e.
   
 
 0.733
ENSSCAP00000008882
annotation not available
   
 
 0.681
SMNDC1
Survival of motor neuron-related-splicing factor 30.
      
 0.626
MSTO1
Protein misato homolog 1.
   
  
 0.538
TPK1
Thiamin pyrophosphokinase 1 isoform X1.
      
 0.537
ENSSCAP00000004688
annotation not available
      
 0.536
ANKRD49
Ankyrin repeat domain-containing protein 49.
      
 0.534
ATP5PD
F-type H+-transporting ATPase subunit d.
   
  
 0.533
TYRP1
LOW QUALITY PROTEIN: 5,6-dihydroxyindole-2-carboxylic acid oxidase.
      
 0.529
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.