STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAGuanine deaminase isoform X1. (450 aa)    
Predicted Functional Partners:
PNP
Purine nucleoside phosphorylase.
  
 
 0.976
XDH
Xanthine dehydrogenase/oxidase.
  
 
 0.965
APRT
LOW QUALITY PROTEIN: adenine phosphoribosyltransferase.
    
 0.953
ENSSCAP00000004836
Hypoxanthine-guanine phosphoribosyltransferase-like.
    
 0.933
HPRT1
Hypoxanthine-guanine phosphoribosyltransferase.
    
 0.933
UPRT
Uracil phosphoribosyltransferase homolog.
  
 
 0.892
HAL
Histidine ammonia-lyase.
  
 
 0.860
NT5E
5'-nucleotidase.
    
 0.807
MTAP
S-methyl-5'-thioadenosine phosphorylase.
  
 
 0.675
AOX1
Aldehyde oxidase isoform X1.
  
 
 0.667
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.